DREAM Publications
October 29, 2011

2011 Publications

Barbarini, N. and Tiengo A. and Bellazzi, R.
Prediction of peptide reactivity with human IVIg through a knowledge-based approach
PLoS ONE 6(8): e23616. doi:10.1371/journal.pone.0023616

Prill, R.J. and Saez-rodriguez, J. and Alexopoulos, L.G. and Sorger, P.K. and Stolovitzky, G.
Crowdsourcing network inference: the DREAM predictive signaling network challenge
Sci Signal. 2011 Aug 30;4(189):mr7. doi:10.1126/scisignal.2002212

Ellis, J.J. and Kobe, B.
Predicting protein kinase specificity: Predikin update and performance in the DREAM4 challenge
PLoS ONE 6(7): e21169. doi:10.1371/journal.pone.0021169

Loh, P-R. Tucker, G. and Berger, B.
Phenotype Prediction Using Regularized Regression on Genetic Data in the DREAM5 Systems Genetics B Challenge
PLoS ONE 6(12): e29095. doi:10.1371/journal.pone.0029095

Schaffter T1, Marbach D, Floreano D.
GeneNetWeaver: in silico benchmark generation and performance profiling of network inference methods.
Bioinformatics. 2011 Aug 15;27(16):2263-70. doi: 10.1093/bioinformatics/btr373. Epub 2011 Jun 22.